Published February 25, 2016 | Version v1
Software Open

Comparative genomics reveals multiple pathways to mutualism for tick-borne pathogens

  • 1. Washington State University

Description

Accelerated pipeline for DNA and amino acid sequences clustering.

 

Notes

This is a pre-print.

Files

Files (26.6 MB)

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Additional details

References

  • Daily, J., Kalyanaraman, A., Krishnamoorthy, S., Vishnu, A.: A work stealing based approach for enabling scalable optimal sequence homology detection. Journal of Parallel and Distributed Computing 79, 132:142 (2015)
  • Daily, J.A.: Scalable parallel methods for analyzing metagenomics data at extreme scale. PhD thesis, Washington State University, School of Electrical Engineering and Computer Science (2015)
  • Lu, H., Halappanavar, M., Kalyanaraman, A.: Parallel heuristics for scalable community detection. Parallel Computing 47, 19:37 (2015)
  • Lockwood, S. (2016). Application and Extension of pClust to Big Microbial Proteomic Data. PhD thesis, Washington State University