Skip to main content
Download PDF

Erratum to: An integrative genomics approach for identifying novel functional consequences of PBRM1 truncated mutations in clear cell renal cell carcinoma (ccRCC)

BMC Genomics volume 17, Article number: 821 (2016) Cite this article

The Original Article was published on 22 August 2016

Erratum

Following publication of the original article [1] it was brought to our attention that there were three errors in the “Results” section of the article’s abstract. Please see below for the two sentences in which these errors occur:

1. We identified 613 differentially expressed genes (128 up-regulated and 485 down-regulated genes using cutoff |log2FC| < 1 and p < 0.05) in PBRM1 mutated group versus “pan-negative” group.

2. In addition, we identified 1405 differentially methylated CpG sites (targeting 1308 genes, |log2FC| < 1, p < 0.01) and 185 significantly altered microRNAs (|log2FC| < 1, p < 0.05) associated with truncated PBRM1 mutations.

In both sentences the present expression in the article is "|log2FC| < 1". However, this is incorrect, as the cutoff should be "|log2FC| > 1".

References

  1. Wang Y, et al. An integrative genomics approach for identifying novel functional consequences of PBRM1 truncated mutations in clear cell renal cell carcinoma (ccRCC). BMC Genomics. 2016;17 Suppl 7:515.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

Download references

Author information

Authors and Affiliations

  1. Department of Biomedical Informatics, Vanderbilt University School of Medicine, Nashville, TN, 37203, USA

    Yuanyuan Wang, Xingyi Guo & Zhongming Zhao

  2. Division of Epidemiology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA

    Xingyi Guo

  3. Vanderbilt Genetics Institute, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA

    Michael J. Bray

  4. Department of Systems Biology, University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA

    Zhiyong Ding

  5. Department of Cancer Biology, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA

    Zhongming Zhao

  6. Department of Psychiatry, Vanderbilt University School of Medicine, Nashville, TN, 37212, USA

    Zhongming Zhao

  7. Center for Precision Health, School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, 77030, USA

    Zhongming Zhao

Authors
  1. Yuanyuan Wang
    View author publications

    You can also search for this author in PubMed Google Scholar

  2. Xingyi Guo
    View author publications

    You can also search for this author in PubMed Google Scholar

  3. Michael J. Bray
    View author publications

    You can also search for this author in PubMed Google Scholar

  4. Zhiyong Ding
    View author publications

    You can also search for this author in PubMed Google Scholar

  5. Zhongming Zhao
    View author publications

    You can also search for this author in PubMed Google Scholar

Corresponding author

Correspondence to Zhongming Zhao.

Additional information

From The International Conference on Intelligent Biology and Medicine (ICIBM), Indianapolis, IN, USA. 13–15 November 2015

The online version of the original article can be found under doi:10.1186/s12864-016-2906-9.

Rights and permissions

Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Wang, Y., Guo, X., Bray, M.J. et al. Erratum to: An integrative genomics approach for identifying novel functional consequences of PBRM1 truncated mutations in clear cell renal cell carcinoma (ccRCC). BMC Genomics 17, 821 (2016). https://0-doi-org.brum.beds.ac.uk/10.1186/s12864-016-3141-0

Download citation

  • Received:

  • Accepted:

  • Published:

  • DOI: https://0-doi-org.brum.beds.ac.uk/10.1186/s12864-016-3141-0

BMC Genomics

ISSN: 1471-2164

Contact us